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A.N. Belozersky Institute

 Bioinformatics Portal GeneBee

Russian EMBnet Node
Bioinformatics Portal of A.N.Belozersky Institute,
Moscow State University
Supported by the Russian Foundation for Basic Research, grant 06-07-89143
Original Services of GeneBee Group
Databanks screening Sequence analysis
 Screening by keywords  AliBee - Multiple alignment Release 3.0
 Pipeline Screening: Keyword -> Similarity  AliGraf - Graphical Alignment
 AliComp - Alignments Comparison
 Screening by similarity Release 3.0  TreeTop - Phylogenetic Tree Prediction
 DotHelix - Construction of the Full Local Similarity Map
 Screening PROSITE databank by protein sequence  RNA secondary structure prediction
 A4 - Adaptive Automated Annotation Release 2.0
 Screening SWISSPROT/PDB databanks
  by pattern or alignment		  OrfBee - ORF Predictor
 IGLA - Pairwise 3D-alignment
Gene Expression Analysis
 GEA - System for Gene Expression Analysis

GeneBee Group Collaboration Research
  RFBR Development of Bionformatics Portal for Suppporting Research in Molecular and System Biology
  FP6 VIZIER Comparative Structural Genomics of Viral Enzymes Involved in Replication
  INTAS Global and Local Protein Matching
  CRDF Quality Control, ORF detection and Gene Anotation of Peanibacilus dendriformisamd PeanibacillusVortec genomes
Original services of the seminar "Sequences and Structures"
 NPIDB: Nucleic Acid - Protein Interaction Data Base  Complex characteristics of the Homeodomain family
 CluD: Hydrophobic clusters detector in 3D structures  Conserved water molecules in 3D structures
 Interlock structural motifs in all SCOP domains  Geometrical alignment of beta-sheets
 LifeCore: geometrical cores of structural families

Free Methods Installed On GeneBee
 NCBI BLAST 2.2.8 Search  NCBI MegaBlast Service
Basic FASTA 3.4 Homology Search
ClustalW 1.83         [Basic]    [Advanced] Muscle 3.6
 MRS - Mobile Retrieval System